Bret Larget

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Marc A. SuchardProfessor, University of California, Los AngelesVerified email at ucla.edu
Sebastian HöhnaEmmy Noether Research Group Leader, Ludwig-Maximilians-Universität, MünchenVerified email at lmu.de
Aaron DarlingIndependentVerified email at illumina.com
Cécile AnéProfessor, Departments of Statistics and of Botany, University of Wisconsin - MadisonVerified email at wisc.edu
Liang LiuProfessor of Statistics, UGAVerified email at uga.edu
Michael A NewtonProfessor of Statistics and of Biostatistics and Medical Informatics, University of WisconsinVerified email at wisc.edu
DAVID BAUMProfessor of Botany & Fellow of the Wisconsin Institute for Discovery, University of WisconsinVerified email at wisc.edu
Colin DeweyProfessor of Biostatistics and Medical Informatics, University of Wisconsin-MadisonVerified email at biostat.wisc.edu
Cameron CurrieProfessor of Microbiology, University of Wisconsin-MadisonVerified email at bact.wisc.edu
Michael E. AlfaroUCLAVerified email at ucla.edu
David SwoffordVisiting Scientist, Florida Museum of Natural HistoryVerified email at duke.edu
Christopher T SolomonCary Institute of Ecosystem StudiesVerified email at caryinstitute.org
Antonis RokasCornelius Vanderbilt Chair in Biological Sciences, Vanderbilt UniversityVerified email at vanderbilt.edu
Bruce RannalaProfessor, Department of Evolution and Ecology, UC DavisVerified email at ucdavis.edu
Alo LaasAssociated professor, Centre for Limnology, Estonian University of Life SciencesVerified email at emu.ee
Denise BruesewitzAssistant Professor of Environmental Studies, Colby CollegeVerified email at colby.edu
Michael VanniDepartment of Biology, Miami UniversityVerified email at miamioh.edu
Matthew Van de BogertCardno ENTRIXVerified email at cardno.com
Peter A. U. StaehrAarhus University, Department of EcoscienceVerified email at ecos.au.dk
Chih-Yu ChiuAcademia SinicaVerified email at sinica.edu.tw

Bret Larget

Professor of Statistics and of Botany, University of Wisconsin

Verified email at wisc.edu

phylogenetics


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MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space F Ronquist, M Teslenko, P Van Der Mark, DL Ayres, A Darling, S Höhna, ... Systematic biology 61 (3), 539-542, 2012	26916	2012
Markov chain Monte Carlo algorithms for the Bayesian analysis of phylogenetic trees B Larget, DL Simon Molecular biology and evolution 16 (6), 750-759, 1999	2019	1999
Potential applications and pitfalls of Bayesian inference of phylogeny JP Huelsenbeck, B Larget, RE Miller, F Ronquist Systematic biology 51 (5), 673-688, 2002	1037	2002
Bayesian phylogenetic inference via Markov chain Monte Carlo methods B Mau, MA Newton, B Larget Biometrics 55 (1), 1-12, 1999	700	1999
Bayesian phylogenetic model selection using reversible jump Markov chain Monte Carlo JP Huelsenbeck, B Larget, ME Alfaro Molecular biology and evolution 21 (6), 1123-1133, 2004	627	2004
Bayesian estimation of concordance among gene trees C Ané, B Larget, DA Baum, SD Smith, A Rokas Molecular biology and evolution 24 (2), 412-426, 2007	568	2007
BUCKy: gene tree/species tree reconciliation with Bayesian concordance analysis BR Larget, SK Kotha, CN Dewey, C Ané Bioinformatics 26 (22), 2910-2911, 2010	483	2010
Integration of microbial ecology and statistics: a test to compare gene libraries PD Schloss, BR Larget, J Handelsman Applied and environmental microbiology 70 (9), 5485-5492, 2004	415	2004
A compound Poisson process for relaxing the molecular clock JP Huelsenbeck, B Larget, D Swofford Genetics 154 (4), 1879-1892, 2000	415	2000
Ecosystem respiration: drivers of daily variability and background respiration in lakes around the globe CT Solomon, DA Bruesewitz, DC Richardson, KC Rose, ... Limnology and Oceanography 58 (3), 849-866, 2013	269	2013
Efficiency of Markov chain Monte Carlo tree proposals in Bayesian phylogenetics C Lakner, P Van Der Mark, JP Huelsenbeck, B Larget, F Ronquist Systematic biology 57 (1), 86-103, 2008	224	2008
Specificity in the symbiotic association between fungus-growing ants and protective Pseudonocardia bacteria MJ Cafaro, M Poulsen, AEF Little, SL Price, NM Gerardo, B Wong, ... Proceedings of the Royal Society B: Biological Sciences 278 (1713), 1814-1822, 2011	192	2011
Samples and populations B Hanlon, B Larget Department of Statistics University of Wisconsin—Madison 14 (2), 10-22, 2011	190	2011
A Bayesian framework for the analysis of cospeciation JP Huelsenbeck, B Rannala, B Larget Evolution 54 (2), 352-364, 2000	183	2000
Fine-scale phylogenetic discordance across the house mouse genome MA White, C Ané, CN Dewey, BR Larget, BA Payseur PLoS Genetics 5 (11), e1000729, 2009	114	2009
A Bayesian analysis of metazoan mitochondrial genome arrangements B Larget, DL Simon, JB Kadane, D Sweet Molecular Biology and Evolution 22 (3), 486-495, 2005	88	2005
Bayesian phylogenetic inference from animal mitochondrial genome arrangements B Larget, DL Simon, JB Kadane Journal of the Royal Statistical Society Series B: Statistical Methodology …, 2002	88	2002
Effects of an invasive crayfish on trophic relationships in north‐temperate lake food webs E Nilsson, CT Solomon, KA Wilson, TV Willis, B Larget, ... Freshwater biology 57 (1), 10-23, 2012	79	2012
3.2: Efficient Bayesian phylogenetic inference and model choice across a large model space., 2012, 61 F Ronquist, M Teslenko, P Van Der Mark, DL Ayres, A Darling, S Höhna, ... DOI: https://doi. org/10.1093/sysbio/sys029, 539-542, 0	73
Exploring Tree-Like and Non-Tree-Like Patterns Using Genome Sequences: An Example Using the Inbreeding Plant Species Arabidopsis thaliana (L.) Heynh NWM Stenz, B Larget, DA Baum, C Ané Systematic Biology 64 (5), 809-823, 2015	72	2015

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