| Prottrans: Toward understanding the language of life through self-supervised learning A Elnaggar, M Heinzinger, C Dallago, G Rehawi, Y Wang, L Jones, ... IEEE transactions on pattern analysis and machine intelligence 44 (10), 7112 …, 2021 | 1893 | 2021 |
| Emergent Properties of Reduced-Genome Escherichia coli G Posfai, G Plunkett III, T Fehér, D Frisch, GM Keil, K Umenhoffer, ... science 312 (5776), 1044-1046, 2006 | 884 | 2006 |
| Engineering a reduced Escherichia coli genome V Kolisnychenko, G Plunkett, CD Herring, T Fehér, J Pósfai, FR Blattner, ... Genome research 12 (4), 640-647, 2002 | 416 | 2002 |
| MALDI-TOF MS*□ S E Szájli, T Fehér, KF Medzihradszky measurements 7, 2410-2418, 2008 | 170 | 2008 |
| Low-mutation-rate, reduced-genome Escherichia coli: an improved host for faithful maintenance of engineered genetic constructs B Csörgő, T Fehér, E Tímár, FR Blattner, G Pósfai Microbial cell factories 11, 1-13, 2012 | 159 | 2012 |
| Reduced evolvability of Escherichia coli MDS42, an IS-less cellular chassis for molecular and synthetic biology applications K Umenhoffer, T Fehér, G Balikó, F Ayaydin, J Pósfai, FR Blattner, ... Microbial cell factories 9, 1-12, 2010 | 145 | 2010 |
| Indispensability of horizontally transferred genes and its impact on bacterial genome streamlining I Karcagi, G Draskovits, K Umenhoffer, G Fekete, K Kovács, O Méhi, ... Molecular biology and evolution 33 (5), 1257-1269, 2016 | 105 | 2016 |
| ProtTrans: Towards cracking the language of Life’s code through self-supervised deep learning and high performance computing. arXiv 2020 A Elnaggar, M Heinzinger, C Dallago, G Rihawi, Y Wang, L Jones, ... arXiv preprint arXiv:2007.06225 10, 2007 | 98 | 2007 |
| Systematic genome reductions: theoretical and experimental approaches T Fehér, B Papp, C Pál, G Pósfai Chemical reviews 107 (8), 3498-3513, 2007 | 92 | 2007 |
| Bacteriophage recombineering in the lytic state using the lambda red recombinases T Fehér, I Karcagi, FR Blattner, G Pósfai Microbial biotechnology 5 (4), 466-476, 2012 | 76 | 2012 |
| Engineered K1F bacteriophages kill intracellular Escherichia coli K1 in human epithelial cells C Møller-Olsen, SFS Ho, RD Shukla, T Feher, AP Sagona Scientific reports 8 (1), 17559, 2018 | 73 | 2018 |
| Validation of RetroPath, a computer‐aided design tool for metabolic pathway engineering T Fehér, AG Planson, P Carbonell, A Fernández‐Castané, I Grigoras, ... Biotechnology journal 9 (11), 1446-1457, 2014 | 68 | 2014 |
| Genome-wide abolishment of mobile genetic elements using genome shuffling and CRISPR/Cas-assisted MAGE allows the efficient stabilization of a bacterial chassis K Umenhoffer, G Draskovits, A Nyerges, I Karcagi, B Bogos, E Tímár, ... ACS Synthetic Biology 6 (8), 1471-1483, 2017 | 62 | 2017 |
| Apoptosis of murine thymocytes induced by extracellular ATP is dose-and cytosolic pH-dependent PV Nagy, T Fehér, S Morga, J Matkó Immunology letters 72 (1), 23-30, 2000 | 55 | 2000 |
| Characterization of cycA mutants of Escherichia coli: an assay for measuring in vivo mutation rates T Fehér, B Cseh, K Umenhoffer, I Karcagi, G Pósfai Mutation Research/Fundamental and Molecular Mechanisms of Mutagenesis 595 (1 …, 2006 | 51 | 2006 |
| others Prottrans: Toward understanding the language of life through self-supervised learning A Elnaggar, M Heinzinger, C Dallago, G Rehawi, Y Wang, L Jones, ... IEEE Trans Pattern Anal Mach Intell 44, 7112-7127, 2021 | 49 | 2021 |
| Computer-aided design for metabolic engineering A Fernández-Castané, T Fehér, P Carbonell, C Pauthenier, JL Faulon Journal of biotechnology 192, 302-313, 2014 | 47 | 2014 |
| Competition between transposable elements and mutator genes in bacteria T Fehér, B Bogos, O Méhi, G Fekete, B Csörgő, K Kovács, G Pósfai, ... Molecular biology and evolution 29 (10), 3153-3159, 2012 | 45 | 2012 |
| Scarless Engineering of the Escherichia coli Genome T Fehér, I Karcagi, Z Győrfy, K Umenhoffer, B Csörgő, G Pósfai Microbial Gene Essentiality: Protocols and Bioinformatics, 251-259, 2008 | 41 | 2008 |
| System-level genome editing in microbes B Csörgő, Á Nyerges, G Pósfai, T Fehér Current Opinion in Microbiology 33, 113-122, 2016 | 30 | 2016 |
