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Jeremy G Sumner
Jeremy G Sumner
Verified email at utas.edu.au - Homepage
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Year
Is the general time-reversible model bad for molecular phylogenetics?
JG Sumner, PD Jarvis, J Fernández-Sánchez, BT Kaine, MD Woodhams, ...
Systematic biology 61 (6), 1069-1074, 2012
812012
Lie markov models
JG Sumner, J Fernández-Sánchez, PD Jarvis
Journal of theoretical biology 298, 16-31, 2012
742012
A new hierarchy of phylogenetic models consistent with heterogeneous substitution rates
MD Woodhams, J Fernández-Sánchez, JG Sumner
Systematic biology 64 (4), 638-650, 2015
392015
Markov invariants, plethysms, and phylogenetics
JG Sumner, MA Charleston, LS Jermiin, PD Jarvis
Journal of theoretical biology 253 (3), 601-615, 2008
332008
Low-parameter phylogenetic inference under the general Markov model
BR Holland, PD Jarvis, JG Sumner
Systematic biology 62 (1), 78-92, 2013
312013
Lie Markov models with purine/pyrimidine symmetry
J Fernández-Sánchez, JG Sumner, PD Jarvis, MD Woodhams
Journal of mathematical biology 70, 855-891, 2015
282015
Tensor rank, invariants, inequalities, and applications
ES Allman, PD Jarvis, JA Rhodes, JG Sumner
SIAM Journal on Matrix Analysis and Applications 34 (3), 1014-1045, 2013
282013
Notes on Markov embedding
M Baake, J Sumner
Linear Algebra and its Applications 594, 262-299, 2020
192020
Maximum likelihood estimates of pairwise rearrangement distances
S Serdoz, A Egri-Nagy, J Sumner, BR Holland, PD Jarvis, MM Tanaka, ...
Journal of theoretical biology 423, 31-40, 2017
192017
Markov invariants and the isotropy subgroup of a quartet tree
JG Sumner, PD Jarvis
Journal of theoretical biology 258 (2), 302-310, 2009
192009
A representation-theoretic approach to the calculation of evolutionary distance in bacteria
JG Sumner, PD Jarvis, AR Francis
Journal of Physics A: Mathematical and Theoretical 50 (33), 335601, 2017
182017
The algebra of the general Markov model on phylogenetic trees and networks
JG Sumner, BR Holland, PD Jarvis
Bulletin of mathematical biology 74, 858-880, 2012
182012
Maximum likelihood estimates of rearrangement distance: implementing a representation-theoretic approach
V Terauds, J Sumner
Bulletin of mathematical biology 81, 535-567, 2019
172019
Path integral formulation and Feynman rules for phylogenetic branching models
PD Jarvis, JD Bashford, JG Sumner
Journal of Physics A: Mathematical and General 38 (44), 9621, 2005
172005
The ancient operational code is embedded in the amino acid substitution matrix and aaRS phylogenies
JA Shore, BR Holland, JG Sumner, K Nieselt, PR Wills
Journal of Molecular Evolution 88 (2), 136-150, 2020
162020
Using the tangle: a consistent construction of phylogenetic distance matrices for quartets
JG Sumner, PD Jarvis
Mathematical biosciences 204 (1), 49-67, 2006
162006
U (1)× U (1)× U (1) symmetry of the Kimura 3ST model and phylogenetic branching processes
JD Bashford, PD Jarvis, JG Sumner, MA Steel
Journal of Physics A: Mathematical and General 37 (8), L81, 2004
162004
Entanglement invariants and phylogenetic branching
JG Sumner, PD Jarvis
Journal of mathematical biology 51, 18-36, 2005
152005
Multiplicatively closed Markov models must form Lie algebras
JG Sumner
The ANZIAM Journal 59 (2), 240-246, 2017
112017
Markov invariants for phylogenetic rate matrices derived from embedded submodels
P Jarvis, J Sumner
IEEE/ACM Transactions on Computational Biology and Bioinformatics 9 (3), 828-836, 2012
92012
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