PyRAD: assembly of de novo RADseq loci for phylogenetic analyses DAR Eaton Bioinformatics 30 (13), 1844-1849, 2014 | 855 | 2014 |
ipyrad: Interactive assembly and analysis of RADseq datasets DAR Eaton, I Overcast Bioinformatics, 2020 | 751 | 2020 |
Inferring Phylogeny and Introgression using RADseq Data: An Example from Flowering Plants (Pedicularis: Orobanchaceae) DAR Eaton, RH Ree Systematic biology 62 (5), 689-706, 2013 | 565 | 2013 |
A framework phylogeny of the American oak clade based on sequenced RAD data AL Hipp, DAR Eaton, J Cavender-Bares, E Fitzek, R Nipper, PS Manos PloS one 9 (4), e93975, 2014 | 248 | 2014 |
Misconceptions on missing data in RAD-seq phylogenetics with a deep-scale example from flowering plants DAR Eaton, EL Spriggs, B Park, MJ Donoghue Systematic biology 66 (3), 399-412, 2017 | 244 | 2017 |
Historical introgression among the American live oaks and the comparative nature of tests for introgression DAR Eaton, AL Hipp, A González-Rodríguez, J Cavender-Bares Evolution 69 (10), 2587-2601, 2015 | 225 | 2015 |
Phylogeny and biogeography of the American live oaks (Quercus subsection Virentes): a genomic and population genetics approach J Cavender‐Bares, A González‐Rodríguez, DAR Eaton, AAL Hipp, ... Molecular ecology 24 (14), 3668-3687, 2015 | 212 | 2015 |
Practical considerations for plant phylogenomics MR McKain, MG Johnson, S Uribe‐Convers, D Eaton, Y Yang Applications in plant sciences 6 (3), e1038, 2018 | 193 | 2018 |
Floral diversity and community structure in Pedicularis (Orobanchaceae) DAR Eaton, CB Fenster, J Hereford, SQ Huang, RH Ree Ecology 93 (sp8), S182-S194, 2012 | 132 | 2012 |
Genotyping-by-sequencing as a tool to infer phylogeny and ancestral hybridization: a case study in Carex (Cyperaceae) M Escudero, DAR Eaton, M Hahn, AL Hipp Molecular Phylogenetics and Evolution 79, 359-367, 2014 | 130 | 2014 |
Paths to selection on life history loci in different natural environments across the native range of Arabidopsis thaliana A Fournier‐Level, AM Wilczek, MD Cooper, JL Roe, J Anderson, D Eaton, ... Molecular ecology 22 (13), 3552-3566, 2013 | 116 | 2013 |
Coral hybridization or phenotypic variation? Genomic data reveal gene flow between Porites lobata and P. compressa ZH Forsman, ISS Knapp, K Tisthammer, DAR Eaton, M Belcaid, ... Molecular Phylogenetics and Evolution 111, 132-148, 2017 | 77 | 2017 |
Identification of SNP markers for inferring phylogeny in temperate bamboos (P oaceae: B ambusoideae) using RAD sequencing XQ Wang, L Zhao, DAR Eaton, DZ Li, ZH Guo Molecular Ecology Resources 13 (5), 938-945, 2013 | 66 | 2013 |
Toytree: A minimalist tree visualization and manipulation library for Python DAR Eaton Methods in Ecology and Evolution 11 (1), 187-191, 2020 | 63 | 2020 |
Parallel ddRAD and genome skimming analyses reveal a radiative and reticulate evolutionary history of the temperate bamboos C Guo, PF Ma, GQ Yang, XY Ye, Y Guo, JX Liu, YL Liu, DAR Eaton, ... Systematic Biology 70 (4), 756-773, 2021 | 60 | 2021 |
Joint Phylogenetic Estimation of Geographic Movements and Biome Shifts during the Global Diversification of Viburnum MJ Landis, DAR Eaton, WL Clement, B Park, EL Spriggs, PW Sweeney, ... Systematic Biology 70 (1), 67-85, 2021 | 52 | 2021 |
Phylogeny of Hawaiian Melicope (Rutaceae): RAD-seq Resolves Species Relationships and Reveals Ancient Introgression C Paetzold, KR Wood, DAR Eaton, WL Wagner, MS Appelhans Frontiers in plant science 10, 1074, 2019 | 49 | 2019 |
Restriction-Site-Associated DNA Sequencing Reveals a Cryptic Viburnum Species on the North American Coastal Plain EL Spriggs, DAR Eaton, PW Sweeney, C Schlutius, EJ Edwards, ... Systematic Biology 68 (2), 187-203, 2019 | 48 | 2019 |
Inferring processes of coevolutionary diversification in a community of Panamanian strangler figs and associated pollinating wasps JD Satler, EA Herre, KC Jandér, DAR Eaton, CA Machado, TA Heath, ... Evolution 73 (11), 2295-2311, 2019 | 39 | 2019 |
Differences in flowering time maintain species boundaries in a continental radiation of Viburnum EL Spriggs, C Schlutius, DA Eaton, B Park, PW Sweeney, EJ Edwards, ... American Journal of Botany 106 (6), 833-849, 2019 | 31 | 2019 |