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Chris Dupont
Chris Dupont
Verified email at jcvi.org
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Pluses and minuses of ammonium and nitrate uptake and assimilation by phytoplankton and implications for productivity and community composition, with emphasis on nitrogen …
PM Glibert, FP Wilkerson, RC Dugdale, JA Raven, CL Dupont, PR Leavitt, ...
Limnology and Oceanography 61 (1), 165-197, 2016
7132016
The tiny eukaryote Ostreococcus provides genomic insights into the paradox of plankton speciation
B Palenik, J Grimwood, A Aerts, P Rouzé, A Salamov, N Putnam, ...
Proceedings of the National Academy of Sciences 104 (18), 7705-7710, 2007
7122007
A genomic catalog of Earth’s microbiomes
S Nayfach, S Roux, R Seshadri, D Udwary, N Varghese, F Schulz, D Wu, ...
Nature biotechnology 39 (4), 499-509, 2021
6792021
Evolution and metabolic significance of the urea cycle in photosynthetic diatoms
AE Allen, CL Dupont, M Oborník, A Horák, A Nunes-Nesi, JP McCrow, ...
Nature 473 (7346), 203-207, 2011
5842011
Microbial metagenomics: beyond the genome
JA Gilbert, CL Dupont
Annual review of marine science 3 (1), 347-371, 2011
5432011
Genomic insights to SAR86, an abundant and uncultivated marine bacterial lineage
CL Dupont, DB Rusch, S Yooseph, MJ Lombardo, R Alexander Richter, ...
The ISME journal 6 (6), 1186-1199, 2012
5332012
Efficiency of the CO2-concentrating mechanism of diatoms
BM Hopkinson, CL Dupont, AE Allen, FMM Morel
Proceedings of the National Academy of Sciences 108 (10), 3830-3837, 2011
4422011
Copper toxicity and the origin of bacterial resistance—new insights and applications
CL Dupont, G Grass, C Rensing
Metallomics 3 (11), 1109-1118, 2011
3922011
Evolutionary genomics of the cold-adapted diatom Fragilariopsis cylindrus
T Mock, RP Otillar, J Strauss, M McMullan, P Paajanen, J Schmutz, ...
Nature 541 (7638), 536-540, 2017
3892017
History of biological metal utilization inferred through phylogenomic analysis of protein structures
CL Dupont, A Butcher, RE Valas, PE Bourne, G Caetano-Anollés
Proceedings of the National Academy of Sciences 107 (23), 10567-10572, 2010
3392010
Designer diatom episomes delivered by bacterial conjugation
BJ Karas, RE Diner, SC Lefebvre, J McQuaid, APR Phillips, CM Noddings, ...
Nature communications 6 (1), 6925, 2015
3382015
Genomic and functional adaptation in surface ocean planktonic prokaryotes
S Yooseph, KH Nealson, DB Rusch, JP McCrow, CL Dupont, M Kim, ...
Nature 468 (7320), 60-66, 2010
3212010
Targeted metagenomics and ecology of globally important uncultured eukaryotic phytoplankton
ML Cuvelier, AE Allen, A Monier, JP McCrow, M Messié, SG Tringe, ...
Proceedings of the National Academy of Sciences 107 (33), 14679-14684, 2010
3112010
Genome sequence of Synechococcus CC9311: insights into adaptation to a coastal environment
B Palenik, Q Ren, CL Dupont, GS Myers, JF Heidelberg, JH Badger, ...
Proceedings of the National Academy of Sciences 103 (36), 13555-13559, 2006
2862006
Modern proteomes contain putative imprints of ancient shifts in trace metal geochemistry
CL Dupont, S Yang, B Palenik, PE Bourne
Proceedings of the National Academy of Sciences 103 (47), 17822-17827, 2006
2832006
Genomic and proteomic characterization of “Candidatus Nitrosopelagicus brevis”: an ammonia-oxidizing archaeon from the open ocean
AE Santoro, CL Dupont, RA Richter, MT Craig, P Carini, MR McIlvin, ...
Proceedings of the National Academy of Sciences 112 (4), 1173-1178, 2015
2752015
Efficient de novo assembly of single-cell bacterial genomes from short-read data sets
H Chitsaz, JL Yee-Greenbaum, G Tesler, MJ Lombardo, CL Dupont, ...
Nature biotechnology 29 (10), 915-921, 2011
2552011
Host genetic control of the oral microbiome in health and disease
A Gomez, JL Espinoza, DM Harkins, P Leong, R Saffery, M Bockmann, ...
Cell host & microbe 22 (3), 269-278. e3, 2017
2262017
Functional tradeoffs underpin salinity-driven divergence in microbial community composition
CL Dupont, J Larsson, S Yooseph, K Ininbergs, J Goll, ...
PloS one 9 (2), e89549, 2014
2092014
Candidate phylum TM6 genome recovered from a hospital sink biofilm provides genomic insights into this uncultivated phylum
JS McLean, MJ Lombardo, JH Badger, A Edlund, M Novotny, ...
Proceedings of the National Academy of Sciences 110 (26), E2390-E2399, 2013
1952013
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