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Eoin Brodie
Eoin Brodie
Deputy Division Director, Climate and Ecosystem Sciences, Lawrence Berkeley National Lab
Verified email at lbl.gov - Homepage
Title
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Cited by
Year
Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB
TZ DeSantis, P Hugenholtz, N Larsen, M Rojas, EL Brodie, K Keller, ...
Applied and environmental microbiology 72 (7), 5069-5072, 2006
116502006
Induction of intestinal Th17 cells by segmented filamentous bacteria
II Ivanov, K Atarashi, N Manel, EL Brodie, T Shima, U Karaoz, D Wei, ...
Cell 139 (3), 485-498, 2009
49232009
Dynamic root exudate chemistry and microbial substrate preferences drive patterns in rhizosphere microbial community assembly
K Zhalnina, KB Louie, Z Hao, N Mansoori, UN Da Rocha, S Shi, H Cho, ...
Nature microbiology 3 (4), 470-480, 2018
14122018
NAST: a multiple sequence alignment server for comparative analysis of 16S rRNA genes
TZ DeSantis, P Hugenholtz, K Keller, EL Brodie, N Larsen, YM Piceno, ...
Nucleic acids research 34 (suppl_2), W394-W399, 2006
12082006
Thousands of microbial genomes shed light on interconnected biogeochemical processes in an aquifer system
K Anantharaman, CT Brown, LA Hug, I Sharon, CJ Castelle, AJ Probst, ...
Nature communications 7 (1), 13219, 2016
9852016
Urban aerosols harbor diverse and dynamic bacterial populations
EL Brodie, TZ DeSantis, JPM Parker, IX Zubietta, YM Piceno, ...
Proceedings of the National Academy of Sciences 104 (1), 299-304, 2007
8282007
Airway microbiota and bronchial hyperresponsiveness in patients with suboptimally controlled asthma
YJ Huang, CE Nelson, EL Brodie, TZ DeSantis, MS Baek, J Liu, T Woyke, ...
Journal of Allergy and Clinical Immunology 127 (2), 372-381. e3, 2011
7792011
Differential growth responses of soil bacterial taxa to carbon substrates of varying chemical recalcitrance
KC Goldfarb, U Karaoz, CA Hanson, CA Santee, MA Bradford, ...
Frontiers in microbiology 2, 94, 2011
6022011
High-density universal 16S rRNA microarray analysis reveals broader diversity than typical clone library when sampling the environment
TZ DeSantis, EL Brodie, JP Moberg, IX Zubieta, YM Piceno, GL Andersen
Microbial ecology 53, 371-383, 2007
6012007
Defining trait-based microbial strategies with consequences for soil carbon cycling under climate change
AA Malik, JBH Martiny, EL Brodie, AC Martiny, KK Treseder, SD Allison
The ISME journal 14 (1), 1-9, 2020
5672020
Application of a high-density oligonucleotide microarray approach to study bacterial population dynamics during uranium reduction and reoxidation
EL Brodie, TZ DeSantis, DC Joyner, SM Baek, JT Larsen, GL Andersen, ...
Applied and environmental microbiology 72 (9), 6288-6298, 2006
5592006
Environmental genomics reveals a single-species ecosystem deep within Earth
D Chivian, EL Brodie, EJ Alm, DE Culley, PS Dehal, TZ DeSantis, ...
Science 322 (5899), 275-278, 2008
5292008
Use of 16S rRNA gene for identification of a broad range of clinically relevant bacterial pathogens
R Srinivasan, U Karaoz, M Volegova, J MacKichan, M Kato-Maeda, ...
PloS one 10 (2), e0117617, 2015
5072015
Airway microbiota and pathogen abundance in age-stratified cystic fibrosis patients
MJ Cox, M Allgaier, B Taylor, MS Baek, YJ Huang, RA Daly, U Karaoz, ...
PloS one 5 (6), e11044, 2010
5022010
Design of 16S rRNA gene primers for 454 pyrosequencing of the human foregut microbiome
CW Nossa, WE Oberdorf, L Yang, JA Aas, BJ Paster, TZ DeSantis, ...
World journal of gastroenterology: WJG 16 (33), 4135, 2010
4662010
Rainfall-induced carbon dioxide pulses result from sequential resuscitation of phylogenetically clustered microbial groups
SA Placella, EL Brodie, MK Firestone
Proceedings of the National Academy of Sciences 109 (27), 10931-10936, 2012
4632012
Long-term sustainability of a high-energy, low-diversity crustal biome
LH Lin, PL Wang, D Rumble, J Lippmann-Pipke, E Boice, LM Pratt, ...
Science 314 (5798), 479-482, 2006
4372006
Gut microbiota mediate caffeine detoxification in the primary insect pest of coffee
JA Ceja-Navarro, FE Vega, U Karaoz, Z Hao, S Jenkins, HC Lim, ...
Nature communications 6 (1), 7618, 2015
4292015
Bacterial diversity and White Plague Disease-associated community changes in the Caribbean coral Montastraea faveolata
S Sunagawa, TZ DeSantis, YM Piceno, EL Brodie, MK DeSalvo, ...
The ISME journal 3 (5), 512-521, 2009
4262009
Life and death in the soil microbiome: how ecological processes influence biogeochemistry
NW Sokol, E Slessarev, GL Marschmann, A Nicolas, SJ Blazewicz, ...
Nature Reviews Microbiology 20 (7), 415-430, 2022
4082022
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