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James Cotton
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Whole genome sequencing of multiple Leishmania donovani clinical isolates provides insights into population structure and mechanisms of drug resistance
T Downing, H Imamura, S Decuypere, TG Clark, GH Coombs, JA Cotton, ...
Genome research 21 (12), 2143-2156, 2011
5002011
Genomic Insights into the Origin of Parasitism in the Emerging Plant Pathogen Bursaphelenchus xylophilus
T Kikuchi, JA Cotton, JJ Dalzell, K Hasegawa, N Kanzaki, P McVeigh, ...
PLoS pathogens 7 (9), e1002219, 2011
4552011
Genome-wide signatures of convergent evolution in echolocating mammals
J Parker, G Tsagkogeorga, JA Cotton, Y Liu, P Provero, E Stupka, ...
Nature 502 (7470), 228-231, 2013
4062013
Comparative genomics of the major parasitic worms
A Coghlan, R Tyagi, JA Cotton, N Holroyd, BA Rosa, IJ Tsai, DR Laetsch, ...
Nature genetics 51 (1), 163-174, 2019
403*2019
Genetic analysis of the cytoplasmic dynein subunit families
KK Pfister, PR Shah, H Hummerich, A Russ, J Cotton, AA Annuar, ...
PLoS genetics 2 (1), e1, 2006
3782006
The genome and transcriptome of Haemonchus contortus, a key model parasite for drug and vaccine discovery
R Laing, T Kikuchi, A Martinelli, IJ Tsai, RN Beech, E Redman, N Holroyd, ...
Genome Biol 14 (8), R88, 2013
3742013
The Ediacaran emergence of bilaterians: congruence between the genetic and the geological fossil records
KJ Peterson, JA Cotton, JG Gehling, D Pisani
Philosophical Transactions of the Royal Society of London B: Biological …, 2008
3502008
Comparative Genomics of the Apicomplexan Parasites Toxoplasma gondii and Neospora caninum: Coccidia Differing in Host Range and Transmission Strategy
AJ Reid, SJ Vermont, JA Cotton, D Harris, GA Hill-Cawthorne, ...
PLoS Pathogens 8 (3), e1002567, 2012
2662012
The genome and life-stage specific transcriptomes of Globodera pallida elucidate key aspects of plant parasitism by a cyst nematode
JA Cotton, CJ Lilley, LM Jones, T Kikuchi, AJ Reid, P Thorpe, IJ Tsai, ...
Genome Biol 15, R43, 2014
2652014
Convergent sequence evolution between echolocating bats and dolphins
Y Liu, JA Cotton, B Shen, X Han, SJ Rossiter, S Zhang
Current Biology 20 (2), R53-R54, 2010
2532010
Genome sequence of the tsetse fly (Glossina morsitans): vector of African trypanosomiasis
International Glossina Genome Initiative
Science 344 (6182), 380-386, 2014
249*2014
The genomic basis of parasitism in the Strongyloides clade of nematodes
VL Hunt, IJ Tsai, A Coghlan, AJ Reid, N Holroyd, BJ Foth, A Tracey, ...
Nature genetics 48 (3), 299-307, 2016
2472016
The evolution of color vision in nocturnal mammals
H Zhao, SJ Rossiter, EC Teeling, C Li, JA Cotton, S Zhang
Proceedings of the National Academy of Sciences 106 (22), 8980-8985, 2009
2272009
Supertrees disentangle the chimerical origin of eukaryotic genomes
D Pisani, JA Cotton, JO McInerney
Molecular biology and evolution 24 (8), 1752-1760, 2007
2162007
Plasmodium malariae and P. ovale genomes provide insights into malaria parasite evolution
GG Rutledge, U Böhme, M Sanders, AJ Reid, JA Cotton, ...
Nature 542 (7639), 101-104, 2017
2142017
Reduced Efficacy of Praziquantel Against Schistosoma mansoni Is Associated With Multiple Rounds of Mass Drug Administration
T Crellen, M Walker, PHL Lamberton, NB Kabatereine, EM Tukahebwa, ...
Clinical Infectious Diseases 63 (9), 1151-1159, 2016
2042016
The genome of the yellow potato cyst nematode, Globodera rostochiensis, reveals insights into the basis of parasitism and virulence
S Eves-van den Akker, DR Laetsch, P Thorpe, CJ Lilley, EGJ Danchin, ...
Genome Biology 17 (1), 1, 2016
1922016
Phylogenomic Analyses Elucidate the Evolutionary Relationships of Bats
G Tsagkogeorga, J Parker, E Stupka, JA Cotton, SJ Rossiter
Current Biology 23 (22), 2262-2267, 2013
1842013
Whipworm genome and dual-species transcriptome analyses provide molecular insights into an intimate host-parasite interaction
BJ Foth, IJ Tsai, AJ Reid, AJ Bancroft, S Nichol, A Tracey, N Holroyd, ...
Nature genetics 46 (7), 693-700, 2014
1702014
Evolutionary genomics of epidemic visceral leishmaniasis in the Indian subcontinent
H Imamura, T Downing, F Van den Broeck, MJ Sanders, S Rijal, S Sundar, ...
eLife 5, e12613, 2016
1692016
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