| Network-based methods for predicting essential genes or proteins: a survey X Li, W Li, M Zeng, R Zheng, M Li Briefings in bioinformatics 21 (2), 566-583, 2020 | 136 | 2020 |
| Sequence-derived markers of drug targets and potentially druggable human proteins S Ghadermarzi, X Li, M Li, L Kurgan Frontiers in genetics 10, 1075, 2019 | 27 | 2019 |
| NIDM: network impulsive dynamics on multiplex biological network for disease-gene prediction J Xiang, J Zhang, R Zheng, X Li, M Li Briefings in Bioinformatics 22 (5), bbab080, 2021 | 26 | 2021 |
| FUNMarker: Fusion network-based method to identify prognostic and heterogeneous breast cancer biomarkers X Li, J Xiang, J Wang, J Li, FX Wu, M Li IEEE/ACM transactions on computational biology and bioinformatics 18 (6 …, 2020 | 11 | 2020 |
| Evaluation of pathway activation for a single sample toward inflammatory bowel disease classification X Li, M Li, R Zheng, X Chen, J Xiang, FX Wu, J Wang Frontiers in Genetics 10, 1401, 2020 | 10 | 2020 |
| SEPA: signaling entropy-based algorithm to evaluate personalized pathway activation for survival analysis on pan-cancer data X Li, M Li, J Xiang, Z Zhao, X Shang Bioinformatics 38 (9), 2536-2543, 2022 | 8 | 2022 |
| A sequence-based machine learning model for predicting antigenic distance for H3N2 influenza virus X Li, Y Li, X Shang, H Kong Frontiers in Microbiology 15, 1345794, 2024 | 6 | 2024 |
| NetAUC: A network-based multi-biomarker identification method by AUC optimization XY Li, J Xiang, FX Wu, M Li Methods 198, 56-64, 2022 | 6 | 2022 |
| A dual ranking algorithm based on the multiplex network for heterogeneous complex disease analysis X Li, J Xiang, FX Wu, M Li IEEE/ACM Transactions on Computational Biology and Bioinformatics 19 (4 …, 2021 | 5 | 2021 |
| Multiplex networks and pan-cancer multiomics-based driver gene identification using graph neural networks X Li, J Li, J Hao, X Liao, M Li, X Shang Big Data Mining and Analytics 7 (4), 1262-1272, 2024 | 4 | 2024 |
| Scbean: a python library for single-cell multi-omics data analysis H Zhang, Y Wang, B Lian, Y Wang, X Li, T Wang, X Shang, H Yang, ... Bioinformatics 40 (2), btae053, 2024 | 2 | 2024 |
| A multi-source fusion method to identify biomarkers for breast cancer prognosis based on dual-layer heterogeneous network X Li, Z Zhao, J Xiang, J Hu, X Shang 2022 IEEE International Conference on Bioinformatics and Biomedicine (BIBM …, 2022 | 2 | 2022 |
| Identification of prognostic and heterogeneous breast cancer biomarkers based on fusion network and multiple scoring strategies X Li, J Xiang, J Wang, FX Wu, M Li Intelligent Computing Theories and Application: 15th International …, 2019 | 2 | 2019 |
| Towards simplified graph neural networks for identifying cancer driver genes in heterophilic networks X Li, J Xu, J Li, J Gu, X Shang Briefings in Bioinformatics 26 (1), bbae691, 2025 | 1 | 2025 |
| SSCI: Self-Supervised Deep Learning Improves Network Structure for Cancer Driver Gene Identification J Xu, J Hao, X Liao, X Shang, X Li International Journal of Molecular Sciences 25 (19), 10351, 2024 | 1 | 2024 |
| Pathway activation analysis for pan-cancer personalized characterization based on riemannian manifold X Li, J Hao, J Li, Z Zhao, X Shang, M Li International Journal of Molecular Sciences 25 (8), 4411, 2024 | 1 | 2024 |
| A topological AUC-based biomarker ensemble method for the complex disease analysis X Li, J Xiang, FX Wu, M Li 2020 IEEE International Conference on Bioinformatics and Biomedicine (BIBM …, 2020 | 1 | 2020 |
| Classification of schizophrenia by iterative random forest feature selection based on DNA methylation array data X Hu, M Li, L Wang, X Li, FX Wu, J Wang 2019 IEEE International Conference on Bioinformatics and Biomedicine (BIBM …, 2019 | 1 | 2019 |
| DualRank: Multiplex network-based dual ranking for heterogeneous complex disease analysis X Li, J Xiang, X Hu, FX Wu, M Li 2019 IEEE International Conference on Bioinformatics and Biomedicine (BIBM …, 2019 | 1 | 2019 |
| PathActMarker: an R package for inferring pathway activity of complex diseases X Li, J Hao, Z Zhao, J Li, X Liao, M Li, X Shang Frontiers of Computer Science 19 (3), 193908, 2025 | | 2025 |
Min LiSchool of Computer Science and Engineering, Central South UniversityVerified email at mail.csu.edu.cn
