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Jesse W. Breinholt
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Phylogenomics reveals the evolutionary timing and pattern of butterflies and moths
AY Kawahara, D Plotkin, M Espeland, K Meusemann, EFA Toussaint, ...
Proceedings of the National Academy of Sciences 116 (45), 22657-22663, 2019
3982019
A comprehensive and dated phylogenomic analysis of butterflies
M Espeland, J Breinholt, KR Willmott, AD Warren, R Vila, EFA Toussaint, ...
Current Biology 28 (5), 770-778. e5, 2018
3652018
Phylogenomics provides strong evidence for relationships of butterflies and moths
AY Kawahara, JW Breinholt
Proceedings of the Royal Society B 281 (1788), 1471-2954, 2014
2442014
A phylogenomic framework, evolutionary timeline and genomic resources for comparative studies of decapod crustaceans
JM Wolfe, JW Breinholt, KA Crandall, AR Lemmon, EM Lemmon, LE Timm, ...
Proceedings of the Royal Society B 286 (1901), 20190079, 2019
1962019
The emergence of lobsters: phylogenetic relationships, morphological evolution and divergence time comparisons of an ancient group (Decapoda: Achelata, Astacidea, Glypheidea …
HD Bracken-Grissom, ST Ahyong, RD Wilkinson, RM Feldmann, ...
Systematic Biology 63 (4), 457-479, 2014
1792014
Resolving relationships among the megadiverse butterflies and moths with a novel pipeline for anchored phylogenomics
JW Breinholt, C Earl, AR Lemmon, EM Lemmon, L Xiao, AY Kawahara
Systematic Biology 67 (1), 78-93, 2018
1652018
Evidence for common horizontal transmission of Wolbachia among butterflies and moths
MZ Ahmed, JW Breinholt, AY Kawahara
BMC evolutionary biology 16, 1-16, 2016
1422016
Phylotranscriptomics: saturated third codon positions radically influence the estimation of trees based on next-gen data
JW Breinholt, AY Kawahara
Genome Biology and Evolution 5 (11), 2082-2092, 2013
1152013
Underground evolution: new roots for the old tree of lumbricid earthworms
J Domínguez, M Aira, JW Breinholt, M Stojanovic, SW James, ...
Molecular phylogenetics and evolution 83, 7-19, 2015
1082015
A molecular phylogeny and revised higher‐level classification for the leaf‐mining moth family G racillariidae and its implications for larval host‐use evolution
AY Kawahara, D Plotkin, I Ohshima, C LOPEZ‐VAAMONDE, PR Houlihan, ...
Systematic Entomology 42 (1), 60-81, 2017
1022017
Moth tails divert bat attack: evolution of acoustic deflection
JR Barber, BC Leavell, AL Keener, JW Breinholt, BA Chadwell, ...
Proceedings of the National Academy of Sciences 112 (9), 2812-2816, 2015
922015
Phylogenomics resolves major relationships and reveals significant diversification rate shifts in the evolution of silk moths and relatives
CA Hamilton, RA St Laurent, K Dexter, IJ Kitching, JW Breinholt, A Zwick, ...
BMC evolutionary biology 19, 1-13, 2019
892019
The Global Invertebrate Genomics Alliance (GIGA): Developing community resources to study diverse invertebrate genomes
JV Lopez, H Bracken-Grissom, AG Collins, T Collins, K Crandall, D Distel, ...
Journal of Heredity 105, 2014
812014
Using phylogenetically-informed annotation (PIA) to search for light-interacting genes in transcriptomes from non-model organisms
DI Speiser, MS Pankey, AK Zaharoff, BA Battelle, HD Bracken-Grissom, ...
BMC bioinformatics 15, 1-12, 2014
802014
A target enrichment probe set for resolving the flagellate land plant tree of life
JW Breinholt, SB Carey, GP Tiley, EC Davis, L Endara, SF McDaniel, ...
Applications in plant sciences 9 (1), e11406, 2021
702021
Anchored phylogenomics illuminates the skipper butterfly tree of life
EFA Toussaint, JW Breinholt, C Earl, AD Warren, AVZ Brower, M Yago, ...
BMC Evolutionary Biology 18, 1-11, 2018
702018
Phylogeny and classification of Odonata using targeted genomics
SM Bybee, VJ Kalkman, RJ Erickson, PB Frandsen, JW Breinholt, ...
Molecular phylogenetics and evolution 160, 107115, 2021
682021
Unioverse: a phylogenomic resource for reconstructing the evolution of freshwater mussels (Bivalvia, Unionoida)
JM Pfeiffer, JW Breinholt, LM Page
Molecular Phylogenetics and Evolution 137, 114-126, 2019
672019
A global phylogeny of butterflies reveals their evolutionary history, ancestral hosts and biogeographic origins
AY Kawahara, C Storer, APS Carvalho, DM Plotkin, FL Condamine, ...
Nature ecology & evolution 7 (6), 903-913, 2023
652023
Body size affects the evolution of eyespots in caterpillars
TJ Hossie, J Skelhorn, JW Breinholt, AY Kawahara, TN Sherratt
Proceedings of the National Academy of Sciences 112 (21), 6664-6669, 2015
632015
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