| The SILVA ribosomal RNA gene database project: improved data processing and web-based tools C Quast, E Pruesse, P Yilmaz, J Gerken, T Schweer, P Yarza, J Peplies, ... Nucleic acids research 41 (D1), D590-D596, 2012 | 26981 | 2012 |
| Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2 E Bolyen, JR Rideout, MR Dillon, NA Bokulich, CC Abnet, GA Al-Ghalith, ... Nature biotechnology 37 (8), 852-857, 2019 | 17370 | 2019 |
| Evaluation of general 16S ribosomal RNA gene PCR primers for classical and next-generation sequencing-based diversity studies A Klindworth, E Pruesse, T Schweer, J Peplies, C Quast, M Horn, ... Nucleic acids research 41 (1), e1-e1, 2013 | 8047 | 2013 |
| SILVA: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB E Pruesse, C Quast, K Knittel, BM Fuchs, W Ludwig, J Peplies, ... Nucleic acids research 35 (21), 7188-7196, 2007 | 7040 | 2007 |
| The SILVA and “all-species living tree project (LTP)” taxonomic frameworks P Yilmaz, LW Parfrey, P Yarza, J Gerken, E Pruesse, C Quast, T Schweer, ... Nucleic acids research 42 (D1), D643-D648, 2014 | 3303 | 2014 |
| SINA: accurate high-throughput multiple sequence alignment of ribosomal RNA genes E Pruesse, J Peplies, FO Glöckner Bioinformatics 28 (14), 1823-1829, 2012 | 3090 | 2012 |
| Uniting the classification of cultured and uncultured bacteria and archaea using 16S rRNA gene sequences P Yarza, P Yilmaz, E Pruesse, FO Glöckner, W Ludwig, KH Schleifer, ... Nature Reviews Microbiology 12 (9), 635-645, 2014 | 2491 | 2014 |
| Bioconda: sustainable and comprehensive software distribution for the life sciences B Grüning, R Dale, A Sjödin, BA Chapman, J Rowe, CH Tomkins-Tinch, ... Nature methods 15 (7), 475-476, 2018 | 1167 | 2018 |
| Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specifications P Yilmaz, R Kottmann, D Field, R Knight, JR Cole, L Amaral-Zettler, ... Nature biotechnology 29 (5), 415-420, 2011 | 754 | 2011 |
| phyloFlash: rapid small-subunit rRNA profiling and targeted assembly from metagenomes HR Gruber-Vodicka, BKB Seah, E Pruesse Msystems 5 (5), 10.1128/msystems. 00920-20, 2020 | 259 | 2020 |
| Type 2 and interferon inflammation regulate SARS-CoV-2 entry factor expression in the airway epithelium SP Sajuthi, P DeFord, Y Li, ND Jackson, MT Montgomery, JL Everman, ... Nature communications 11 (1), 5139, 2020 | 223* | 2020 |
| ARB: a software environment for sequence data R Westram, K Bader, E Prüsse, Y Kumar, H Meier, FO Glöckner, ... Handbook of Molecular Microbial Ecology I, 399-406, 2011 | 113 | 2011 |
| FO Glöckner The SILVA ribosomal RNA gene database project: Improved data processing and web-based tools., 2013, 41, pp C Quast, E Pruesse, P Yilmaz, J Gerken, T Schweer, P Yarza, J Peplies D590-D596. DOI: https://doi. org/10.1093/nar/gks1219, 0 | 79 | |
| Analysis of 23S rRNA genes in metagenomes–a case study from the Global Ocean Sampling Expedition P Yilmaz, R Kottmann, E Pruesse, C Quast, FO Glöckner Systematic and applied microbiology 34 (6), 462-469, 2011 | 23 | 2011 |
| SILVA databases C Quast, E Pruesse, J Gerken, T Schweer, P Yilmaz, J Peplies, ... Encyclopedia of Metagenomics: Genes, Genomes and Metagenomes: Basics …, 2015 | 15 | 2015 |
| SILVA: comprehensive databases for quality checked and aligned ribosomal RNA sequence data compatible with ARB E Pruesse, C Quast, P Yilmaz, W Ludwig, FO Glöckner Handbook of Molecular Microbial Ecology I: Metagenomics and Complementary …, 2011 | 12 | 2011 |
| The Puerto Rican Infant Metagenomic and Epidemiologic Study of Respiratory Outcomes (PRIMERO): Design and Baseline Characteristics for a Birth Cohort Study of Early-life Viral … JI Witonsky, JR Elhawary, C Eng, SS Oh, S Salazar, ... medRxiv, 2024.04. 15.24305359, 2024 | 1 | 2024 |
| Type 1 Immune Responses Related to Viral Infection Influence Corticosteroid Response in Asthma JV Fahy, ND Jackson, SP Sajuthi, E Pruesse, CM Moore, JL Everman, ... American Journal of Respiratory and Critical Care Medicine, 2024 | | 2024 |
| Viral Determinants of Childhood Asthma Exacerbation Severity and Treatment Response N Navanandan, ND Jackson, KL Hamlington, JL Everman, E Pruesse, ... The Journal of Allergy and Clinical Immunology: In Practice, 2024 | | 2024 |
| Viral Determinants of Early-Life Lower Respiratory Tract Illnesses: Results From the PRIMERO Birth Cohort Study CM Moore, EA Secor, A Fairbanks-Mahnke, JR Elhawary, JL Everman, ... C17. PEDIATRIC IMPACT OF COVID-19 AND OTHER RESPIRATORY INFECTIONS, A5000-A5000, 2024 | | 2024 |
Prof. Dr. Frank Oliver GlöcknerAlfred Wegener Institute Bremerhaven, MARUM, University of BremenVerified email at awi.de
