| STRING 8—a global view on proteins and their functional interactions in 630 organisms LJ Jensen, M Kuhn, M Stark, S Chaffron, C Creevey, J Muller, T Doerks, ... Nucleic acids research 37 (suppl_1), D412-D416, 2009 | 2934 | 2009 |
| Toward automatic reconstruction of a highly resolved tree of life FD Ciccarelli, T Doerks, C Von Mering, CJ Creevey, B Snel, P Bork Science 311 (5765), 1283, 2006 | 1845 | 2006 |
| Assessment of methods for amino acid matrix selection and their use on empirical data shows that ad hoc assumptions for choice of matrix are not justified T Keane, C Creevey, M Pentony, T Naughton, J Mclnerney BMC evolutionary biology 6 (1), 29, 2006 | 1228 | 2006 |
| eggNOG v4. 0: nested orthology inference across 3686 organisms S Powell, K Forslund, D Szklarczyk, K Trachana, A Roth, J Huerta-Cepas, ... Nucleic acids research 42 (D1), D231-D239, 2014 | 618 | 2014 |
| Cultivation and sequencing of rumen microbiome members from the Hungate1000 Collection R Seshadri, SC Leahy, GT Attwood, KH Teh, SC Lambie, AL Cookson, ... Nature biotechnology 36 (4), 359-367, 2018 | 508 | 2018 |
| Genome-wide experimental determination of barriers to horizontal gene transfer R Sorek, Y Zhu, CJ Creevey, MP Francino, P Bork, EM Rubin Science 318 (5855), 1449, 2007 | 478 | 2007 |
| Addressing global ruminant agricultural challenges through understanding the rumen microbiome: past, present, and future SA Huws, CJ Creevey, LB Oyama, I Mizrahi, SE Denman, M Popova, ... Frontiers in microbiology 9, 2161, 2018 | 387 | 2018 |
| Clann: investigating phylogenetic information through supertree analyses CJ Creevey, JO McInerney Bioinformatics 21 (3), 390-392, 2005 | 229 | 2005 |
| Determining the culturability of the rumen bacterial microbiome CJ Creevey, WJ Kelly, G Henderson, SC Leahy Microbial biotechnology 7 (5), 467-479, 2014 | 221 | 2014 |
| Comparative metagenomic and metatranscriptomic analyses reveal the breed effect on the rumen microbiome and its associations with feed efficiency in beef cattle F Li, TCA Hitch, Y Chen, CJ Creevey, LL Guan Microbiome 7, 1-21, 2019 | 203 | 2019 |
| Genome phylogenies indicate a meaningful α-proteobacterial phylogeny and support a grouping of the mitochondria with the Rickettsiales DA Fitzpatrick, CJ Creevey, JO McInerney Molecular biology and evolution 23 (1), 74-85, 2006 | 177 | 2006 |
| CowPI: a rumen microbiome focussed version of the PICRUSt functional inference software TJ Wilkinson, SA Huws, JE Edwards, AH Kingston-Smith, K Siu-Ting, ... Frontiers in microbiology 9, 1095, 2018 | 162 | 2018 |
| The Opisthokonta and the Ecdysozoa may not be clades: stronger support for the grouping of plant and animal than for animal and fungi and stronger support for the Coelomata … GK Philip, CJ Creevey, JO McInerney Molecular biology and evolution 22 (5), 1175-1184, 2005 | 156 | 2005 |
| Does a tree–like phylogeny only exist at the tips in the prokaryotes? CJ Creevey, DA Fitzpatrick, GK Philip, RJ Kinsella, MJ O'Connell, ... Proceedings of the Royal Society of London. Series B: Biological Sciences …, 2004 | 148 | 2004 |
| RNA-seq analysis of differential gene expression in liver from lactating dairy cows divergent in negative energy balance M McCabe, S Waters, D Morris, D Kenny, D Lynn, C Creevey BMC genomics 13, 1-11, 2012 | 133 | 2012 |
| The shape of supertrees to come: tree shape related properties of fourteen supertree methods M Wilkinson, JA Cotton, C Creevey, O Eulenstein, SR Harris, FJ Lapointe, ... Systematic biology 54 (3), 419-431, 2005 | 125 | 2005 |
| Temporal dynamics of the metabolically active rumen bacteria colonizing fresh perennial ryegrass SA Huws, JE Edwards, CJ Creevey, P Rees Stevens, W Lin, SE Girdwood, ... FEMS microbiology ecology 92 (1), fiv137, 2016 | 121 | 2016 |
| Fatty acid biosynthesis in Mycobacterium tuberculosis: lateral gene transfer, adaptive evolution, and gene duplication RJ Kinsella, DA Fitzpatrick, CJ Creevey, JO McInerney Proceedings of the National Academy of Sciences 100 (18), 10320, 2003 | 120 | 2003 |
| Visualization of multiple alignments, phylogenies and gene family evolution JB Procter, J Thompson, I Letunic, C Creevey, F Jossinet, GJ Barton Nature methods 7 (Suppl 3), S16-S25, 2010 | 118 | 2010 |
| Rumen methanogenic genotypes differ in abundance according to host residual feed intake phenotype and diet type CA Carberry, SM Waters, DA Kenny, CJ Creevey Applied and environmental microbiology 80 (2), 586-594, 2014 | 112 | 2014 |
Sharon HuwsProfessor in Animal Science and Microbiology, Institute of Global Food Security, Queens UniversityVerified email at qub.ac.uk
