Genome-wide kinetics of nucleosome turnover determined by metabolic labeling of histones RB Deal, JG Henikoff, S Henikoff Science 328 (5982), 1161-1164, 2010 | 552 | 2010 |
A simple method for gene expression and chromatin profiling of individual cell types within a tissue RB Deal, S Henikoff Developmental cell 18 (6), 1030-1040, 2010 | 418 | 2010 |
The INTACT method for cell type–specific gene expression and chromatin profiling in Arabidopsis thaliana RB Deal, S Henikoff Nature protocols 6 (1), 56-68, 2011 | 405 | 2011 |
Hairy Root Transformation Using Agrobacterium rhizogenes as a Tool for Exploring Cell Type-Specific Gene Expression and Function Using Tomato as a Model M Ron, K Kajala, G Pauluzzi, D Wang, MA Reynoso, K Zumstein, ... Plant physiology 166 (2), 455-469, 2014 | 399 | 2014 |
Repression of Flowering in Arabidopsis Requires Activation of FLOWERING LOCUS C Expression by the Histone Variant H2A.Z RB Deal, CN Topp, EC McKinney, RB Meagher The Plant Cell 19 (1), 74-83, 2007 | 362 | 2007 |
On the origin and evolutionary consequences of gene body DNA methylation AJ Bewick, L Ji, CE Niederhuth, EM Willing, BT Hofmeister, X Shi, L Wang, ... Proceedings of the National Academy of Sciences 113 (32), 9111-9116, 2016 | 308 | 2016 |
Profiling of accessible chromatin regions across multiple plant species and cell types reveals common gene regulatory principles and new control modules KA Maher, M Bajic, K Kajala, M Reynoso, G Pauluzzi, DA West, ... The Plant Cell 30 (1), 15-36, 2018 | 249 | 2018 |
Histone H2A. Z regulates the expression of several classes of phosphate starvation response genes but not as a transcriptional activator AP Smith, A Jain, RB Deal, VK Nagarajan, MD Poling, KG Raghothama, ... Plant physiology 152 (1), 217-225, 2010 | 196 | 2010 |
The Nuclear Actin-Related Protein ARP6 Is a Pleiotropic Developmental Regulator Required for the Maintenance of FLOWERING LOCUS C Expression and Repression of … RB Deal, MK Kandasamy, EC McKinney, RB Meagher The Plant Cell 17 (10), 2633-2646, 2005 | 191 | 2005 |
Histone variants and modifications in plant gene regulation RB Deal, S Henikoff Current opinion in plant biology 14 (2), 116-122, 2011 | 167 | 2011 |
Cell-type-specific nuclei purification from whole animals for genome-wide expression and chromatin profiling FA Steiner, PB Talbert, S Kasinathan, RB Deal, S Henikoff Genome research 22 (4), 766-777, 2012 | 154 | 2012 |
Identification of open chromatin regions in plant genomes using ATAC-Seq M Bajic, KA Maher, RB Deal Plant chromatin dynamics: Methods and protocols, 183-201, 2018 | 137 | 2018 |
Changes in chromatin accessibility between Arabidopsis stem cells and mesophyll cells illuminate cell type‐specific transcription factor networks P Sijacic, M Bajic, EC McKinney, RB Meagher, RB Deal The Plant Journal 94 (2), 215-231, 2018 | 130 | 2018 |
Evolutionary flexibility in flooding response circuitry in angiosperms MA Reynoso, K Kajala, M Bajic, DA West, G Pauluzzi, AI Yao, K Hatch, ... Science 365 (6459), 1291-1295, 2019 | 129 | 2019 |
The chromatin remodelers PKL and PIE1 act in an epigenetic pathway that determines H3K27me3 homeostasis in Arabidopsis B Carter, B Bishop, KK Ho, R Huang, W Jia, H Zhang, PE Pascuzzi, ... The Plant Cell 30 (6), 1337-1352, 2018 | 128 | 2018 |
Global analysis of the RNA-protein interaction and RNA secondary structure landscapes of the Arabidopsis nucleus SJ Gosai, SW Foley, D Wang, IM Silverman, N Selamoglu, ADL Nelson, ... Molecular cell 57 (2), 376-388, 2015 | 122 | 2015 |
Silencing the nuclear actin‐related protein AtARP4 in Arabidopsis has multiple effects on plant development, including early flowering and delayed floral senescence MK Kandasamy, RB Deal, EC McKinney, RB Meagher The Plant Journal 41 (6), 845-858, 2005 | 97 | 2005 |
Innovation, conservation, and repurposing of gene function in root cell type development K Kajala, M Gouran, L Shaar-Moshe, GA Mason, J Rodriguez-Medina, ... Cell 184 (12), 3333-3348. e19, 2021 | 78 | 2021 |
ACTIN DEPOLYMERIZING FACTOR9 controls development and gene expression in Arabidopsis B Burgos-Rivera, DR Ruzicka, RB Deal, EC McKinney, L King-Reid, ... Plant molecular biology 68, 619-632, 2008 | 77 | 2008 |
Arabidopsis ARP7 is an essential actin-related protein required for normal embryogenesis, plant architecture, and floral organ abscission MK Kandasamy, EC McKinney, RB Deal, RB Meagher Plant physiology 138 (4), 2019-2032, 2005 | 70 | 2005 |