| IQ-TREE 2: new models and efficient methods for phylogenetic inference in the genomic era BQ Minh, HA Schmidt, O Chernomor, D Schrempf, MD Woodhams, ... Molecular biology and evolution 37 (5), 1530-1534, 2020 | 9413 | 2020 |
| UFBoot2: improving the ultrafast bootstrap approximation DT Hoang, O Chernomor, A Von Haeseler, BQ Minh, LS Vinh Molecular biology and evolution 35 (2), 518-522, 2018 | 7892 | 2018 |
| Terrace aware data structure for phylogenomic inference from supermatrices O Chernomor, A Von Haeseler, BQ Minh Systematic biology 65 (6), 997-1008, 2016 | 1848 | 2016 |
| O., Haeseler, AV Minh, BQ Vinh, LS UFBoot2: Improving the ultrafast bootstrap approximation DTC Hoang, O Chernomor Mol. Biol. Evol 35, 518-522, 2017 | 90* | 2017 |
| 2: New models and efficient methods for phylogenetic inference in the genomic era., 2020, 37 BQ Minh, HA Schmidt, O Chernomor, D Schrempf, MD Woodhams, ... DOI: https://doi. org/10.1093/molbev/msaa015, 1530-1534, 2020 | 58 | 2020 |
| Split diversity in constrained conservation prioritization using integer linear programming O Chernomor, BQ Minh, F Forest, S Klaere, T Ingram, M Henzinger, ... Methods in ecology and evolution 6 (1), 83-91, 2015 | 58 | 2015 |
| Molecular electrical properties from quantum Monte Carlo calculations: Application to ethyne E Coccia, O Chernomor, M Barborini, S Sorella, L Guidoni Journal of Chemical Theory and Computation 8 (6), 1952-1962, 2012 | 28 | 2012 |
| Consequences of common topological rearrangements for partition trees in phylogenomic inference O Chernomor, BQ Minh, A von Haeseler Journal of Computational Biology 22 (12), 1129-1142, 2015 | 23 | 2015 |
| Complex evolution of light-dependent protochlorophyllide oxidoreductases in aerobic anoxygenic phototrophs: origin, phylogeny, and function O Chernomor, L Peters, J Schneidewind, A Loeschcke, ... Molecular biology and evolution 38 (3), 819-837, 2021 | 13 | 2021 |
| Split diversity: measuring and optimizing biodiversity using phylogenetic split networks O Chernomor, S Klaere, A von Haeseler, BQ Minh Biodiversity conservation and phylogenetic systematics 14, 173-195, 2016 | 11 | 2016 |
| Molecular archaeology of human cognitive traits J Kaczanowska, F Ganglberger, O Chernomor, D Kargl, B Galik, A Hess, ... Cell Reports 40 (9), 2022 | 9 | 2022 |
| Empirical Analysis of Phylogenetic Quasi-Terraces P Breitling, A Stamatakis, O Chernomor, B Bettisworth, L Reszczynski bioRxiv, 810309, 2019 | 2 | 2019 |
| Identifying equally scoring trees in phylogenomics with incomplete data using gentrius O Chernomor, C Elgert, A von Haeseler https://www. biorxiv. org/content/10.1101/108027v3, 2023 | 1 | 2023 |
| Gentrius: generating trees compatible with a set of unrooted subtrees and its application to phylogenetic terraces O Chernomor, C Elgert, A von Haeseler Molecular Biology and Evolution 41 (11), msae219, 2024 | | 2024 |
| Parallel Inference of Phylogenetic Stands with Gentrius A Togkousidis, O Chernomor, A Stamatakis 2023 IEEE International Parallel and Distributed Processing Symposium …, 2023 | | 2023 |
| Gentrius: identifying equally scoring trees in phylogenomics with incomplete data O Chernomor, C Elgert, A von Haeseler bioRxiv, 2023.01. 19.524678, 2023 | | 2023 |
| Terrace Aware Phylogenomic Inference from Supermatrices O Chernomor, A von Haeseler, BQ Minh | | |
