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Upendra Kumar Devisetty
Upendra Kumar Devisetty
Head of Data Science
Verified email at greenlightbio.com - Homepage
Title
Cited by
Cited by
Year
Bioconda: sustainable and comprehensive software distribution for the life sciences
JK Björn Grüning, Ryan Dale, Andreas Sjödin, Brad A. Chapman, Jillian Rowe ...
Nature Methods 15, 475–476, 2018
11812018
Comparative transcriptomics reveals patterns of selection in domesticated and wild tomato
D Koenig, JM Jiménez-Gómez, S Kimura, D Fulop, DH Chitwood, ...
Proceedings of the National Academy of Sciences 110 (28), E2655-E2662, 2013
4042013
Accurate timekeeping is controlled by a cycling activator in Arabidopsis
PY Hsu, UK Devisetty, SL Harmer
Elife 2, e00473, 2013
2272013
Shade avoidance components and pathways in adult plants revealed by phenotypic profiling
K Nozue, AV Tat, U Kumar Devisetty, M Robinson, MR Mumbach, ...
PLoS Genetics 11 (4), e1004953, 2015
1102015
The Divergence of Flowering Time Modulated by FT/TFL1 Is Independent to Their Interaction and Binding Activities
Z Wang, R Yang, UK Devisetty, JN Maloof, Y Zuo, J Li, Y Shen, J Zhao, ...
Frontiers in Plant Science 8, 697, 2017
422017
Bringing your tools to CyVerse discovery environment using Docker
UK Devisetty, K Kennedy, P Sarando, N Merchant, E Lyons
F1000Research 5, 2016
412016
Polymorphism Identification and Improved Genome Annotation of Brassica rapa Through Deep RNA Sequencing
UK Devisetty, MF Covington, AV Tat, S Lekkala, JN Maloof
G3: Genes, Genomes, Genetics 4 (11), 2065-2078, 2014
392014
A genomic analysis of factors driving lincRNA diversification: lessons from plants
ADL Nelson, ES Forsythe, UK Devisetty, DS Clausen, AK Haug-Batzell, ...
G3: Genes, Genomes, Genetics 6 (9), 2881-2891, 2016
372016
Modeling development and quantitative trait mapping reveal independent genetic modules for leaf size and shape
RL Baker, WF Leong, MT Brock, RJC Markelz, MF Covington, ...
New Phytologist 208 (1), 257-268, 2015
352015
The role of a class III gibberellin 2‐oxidase in tomato internode elongation
A Schrager‐Lavelle, NN Gath, UK Devisetty, E Carrera, I López‐Díaz, ...
The Plant Journal 97 (3), 603-615, 2019
322019
Read mapping and transcript assembly: a scalable and high-throughput workflow for the processing and analysis of ribonucleic acid sequencing data
S Peri, S Roberts, IR Kreko, LB McHan, A Naron, A Ram, RL Murphy, ...
Frontiers in genetics 10, 1361, 2020
312020
Evolinc: a tool for the identification and evolutionary comparison of long intergenic non-coding RNAs
ADL Nelson, UK Devisetty, K Palos, AK Haug-Baltzell, E Lyons, ...
Frontiers in genetics 8, 52, 2017
302017
Genetic architecture, biochemical underpinnings and ecological impact of floral UV patterning
MT Brock, LK Lucas, NA Anderson, MJ Rubin, RJ Cody Markelz, ...
Molecular ecology 25 (5), 1122-1140, 2016
302016
Retrograde induction of phyB orchestrates ethylene-auxin hierarchy to regulate growth
J Jiang, Y Xiao, H Chen, W Hu, L Zeng, H Ke, FA Ditengou, U Devisetty, ...
Plant physiology 183 (3), 1268-1280, 2020
292020
Network analysis reveals a role for salicylic acid pathway components in shade avoidance
K Nozue, UK Devisetty, S Lekkala, P Mueller-Moulé, A Bak, CL Casteel, ...
Plant Physiology 178 (4), 1720-1732, 2018
282018
The RAD51 and DMC1 homoeologous genes of bread wheat: cloning, molecular characterization and expression analysis
UK Devisetty, K Mayes, S Mayes
BMC Research Notes 3, 1-11, 2010
272010
Genotyping‐by‐sequencing and ecological niche modeling illuminate phylogeography, admixture, and Pleistocene range dynamics in quaking aspen (Populus tremuloides )
SHS Justin C. Bagley, Neander M. Heming, Eliécer E. Gutiérrez, Upendra K ...
Ecology and Evolution, 2020
232020
A comparative genomics examination of desiccation tolerance and sensitivity in two sister grass species
RA Chávez Montes, A Haber, J Pardo, RF Powell, UK Divisetty, AT Silva, ...
Proceedings of the National Academy of Sciences 119 (5), e2118886119, 2022
162022
CyVerse: Cyberinfrastructure for open science
TL Swetnam, PB Antin, R Bartelme, A Bucksch, D Camhy, G Chism, I Choi, ...
PLoS Computational Biology 20 (2), e1011270, 2024
152024
Using RNA-Seq for Genomic Scaffold Placement, Correcting Assemblies, and Genetic Map Creation in a Common Brassica rapa Mapping Population
RJC Markelz, MF Covington, MT Brock, UK Devisetty, DJ Kliebenstein, ...
G3: Genes, Genomes, Genetics 7 (7), 2259-2270, 2017
112017
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