Bioconda: sustainable and comprehensive software distribution for the life sciences JK Björn Grüning, Ryan Dale, Andreas Sjödin, Brad A. Chapman, Jillian Rowe ... Nature Methods 15, 475–476, 2018 | 1181 | 2018 |
Comparative transcriptomics reveals patterns of selection in domesticated and wild tomato D Koenig, JM Jiménez-Gómez, S Kimura, D Fulop, DH Chitwood, ... Proceedings of the National Academy of Sciences 110 (28), E2655-E2662, 2013 | 404 | 2013 |
Accurate timekeeping is controlled by a cycling activator in Arabidopsis PY Hsu, UK Devisetty, SL Harmer Elife 2, e00473, 2013 | 227 | 2013 |
Shade avoidance components and pathways in adult plants revealed by phenotypic profiling K Nozue, AV Tat, U Kumar Devisetty, M Robinson, MR Mumbach, ... PLoS Genetics 11 (4), e1004953, 2015 | 110 | 2015 |
The Divergence of Flowering Time Modulated by FT/TFL1 Is Independent to Their Interaction and Binding Activities Z Wang, R Yang, UK Devisetty, JN Maloof, Y Zuo, J Li, Y Shen, J Zhao, ... Frontiers in Plant Science 8, 697, 2017 | 42 | 2017 |
Bringing your tools to CyVerse discovery environment using Docker UK Devisetty, K Kennedy, P Sarando, N Merchant, E Lyons F1000Research 5, 2016 | 41 | 2016 |
Polymorphism Identification and Improved Genome Annotation of Brassica rapa Through Deep RNA Sequencing UK Devisetty, MF Covington, AV Tat, S Lekkala, JN Maloof G3: Genes, Genomes, Genetics 4 (11), 2065-2078, 2014 | 39 | 2014 |
A genomic analysis of factors driving lincRNA diversification: lessons from plants ADL Nelson, ES Forsythe, UK Devisetty, DS Clausen, AK Haug-Batzell, ... G3: Genes, Genomes, Genetics 6 (9), 2881-2891, 2016 | 37 | 2016 |
Modeling development and quantitative trait mapping reveal independent genetic modules for leaf size and shape RL Baker, WF Leong, MT Brock, RJC Markelz, MF Covington, ... New Phytologist 208 (1), 257-268, 2015 | 35 | 2015 |
The role of a class III gibberellin 2‐oxidase in tomato internode elongation A Schrager‐Lavelle, NN Gath, UK Devisetty, E Carrera, I López‐Díaz, ... The Plant Journal 97 (3), 603-615, 2019 | 32 | 2019 |
Read mapping and transcript assembly: a scalable and high-throughput workflow for the processing and analysis of ribonucleic acid sequencing data S Peri, S Roberts, IR Kreko, LB McHan, A Naron, A Ram, RL Murphy, ... Frontiers in genetics 10, 1361, 2020 | 31 | 2020 |
Evolinc: a tool for the identification and evolutionary comparison of long intergenic non-coding RNAs ADL Nelson, UK Devisetty, K Palos, AK Haug-Baltzell, E Lyons, ... Frontiers in genetics 8, 52, 2017 | 30 | 2017 |
Genetic architecture, biochemical underpinnings and ecological impact of floral UV patterning MT Brock, LK Lucas, NA Anderson, MJ Rubin, RJ Cody Markelz, ... Molecular ecology 25 (5), 1122-1140, 2016 | 30 | 2016 |
Retrograde induction of phyB orchestrates ethylene-auxin hierarchy to regulate growth J Jiang, Y Xiao, H Chen, W Hu, L Zeng, H Ke, FA Ditengou, U Devisetty, ... Plant physiology 183 (3), 1268-1280, 2020 | 29 | 2020 |
Network analysis reveals a role for salicylic acid pathway components in shade avoidance K Nozue, UK Devisetty, S Lekkala, P Mueller-Moulé, A Bak, CL Casteel, ... Plant Physiology 178 (4), 1720-1732, 2018 | 28 | 2018 |
The RAD51 and DMC1 homoeologous genes of bread wheat: cloning, molecular characterization and expression analysis UK Devisetty, K Mayes, S Mayes BMC Research Notes 3, 1-11, 2010 | 27 | 2010 |
Genotyping‐by‐sequencing and ecological niche modeling illuminate phylogeography, admixture, and Pleistocene range dynamics in quaking aspen (Populus tremuloides ) SHS Justin C. Bagley, Neander M. Heming, Eliécer E. Gutiérrez, Upendra K ... Ecology and Evolution, 2020 | 23 | 2020 |
A comparative genomics examination of desiccation tolerance and sensitivity in two sister grass species RA Chávez Montes, A Haber, J Pardo, RF Powell, UK Divisetty, AT Silva, ... Proceedings of the National Academy of Sciences 119 (5), e2118886119, 2022 | 16 | 2022 |
CyVerse: Cyberinfrastructure for open science TL Swetnam, PB Antin, R Bartelme, A Bucksch, D Camhy, G Chism, I Choi, ... PLoS Computational Biology 20 (2), e1011270, 2024 | 15 | 2024 |
Using RNA-Seq for Genomic Scaffold Placement, Correcting Assemblies, and Genetic Map Creation in a Common Brassica rapa Mapping Population RJC Markelz, MF Covington, MT Brock, UK Devisetty, DJ Kliebenstein, ... G3: Genes, Genomes, Genetics 7 (7), 2259-2270, 2017 | 11 | 2017 |